CanGEM

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CanGEM

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Project Name

Link

http://www.helsinki.fi/cmg/

Description

This project is for published material of the CMG research group.

Microarray Data

[+] Experiment: Armengol et al.: Genomic imbalances in Schistosoma-associated and non-Schistosoma-associated bladder...CG-EXP-27

[+] Experiment: Atiye et al.: Gene amplifications in osteosarcoma-CGH microarray analysis.CG-EXP-4

[+] Experiment: Ässämäki et al.: Array comparative genomic hybridization analysis of chromosomal imbalances and t...CG-EXP-6

[+] Experiment: Borze et al.: High-resolution oligonucleotide array comparative genomic hybridization study and meth...CG-EXP-156

[+] Experiment: Borze et al.: Oligoarray comparative genomic hybridization in polycythemia vera and essential thromb...CG-EXP-157

[+] Experiment: Kaur et al.: Gene copy number changes in dermatofibrosarcoma protuberans - a fine-resolution study u...CG-EXP-29

[+] Experiment: Kaur et al.: Loss of TP53 in sarcomas with 17p12 to approximately p11 gain. A fine-resolution oligon...CG-EXP-30

[+] Experiment: Kaur et al.: New insights into the cellular pathways affected in primary uterine leiomyosarcomaCG-EXP-31

[+] Experiment: Kaur et al.: No gene copy number changes in Dupuytren's contracture by array comparative genomic hyb...CG-EXP-52

[+] Experiment: Koski et al: Array comparative genomic hybridization identifies a distinct DNA copy number profile i...CG-EXP-48

[+] Experiment: Larramendy et al.: Gene copy number profiling of soft-tissue leiomyosarcomas by array-comparative ge...CG-EXP-23

[+] Experiment: Lindholm et al.: Gene copy number analysis in malignant pleural mesothelioma using oligonucleotide a...CG-EXP-176

[+] Experiment: Myllykangas et al.: Integrated gene copy number and expression microarray analysis of gastric cancer...CG-EXP-26

[+] Experiment: Niini et al.: Array comparative genomic hybridization reveals frequent alterations of G1/S checkpoin...CG-EXP-154

[+] Experiment: Niini et al.: Frequent Deletion of CDKN2A and Recurrent Co-Amplification of KIT, PDGFRA and KDR in F...CG-EXP-53

[+] Experiment: Nymark et al.: Identification of specific gene copy number changes in asbestos-related lung cancer.CG-EXP-5

[+] Experiment: Savola et al.: Combined use of expression and CGH arrays pinpoints novel candidate genes in Ewing sa...CG-EXP-35

[+] Experiment: Siggberg et al.: 9q22 Deletion - First Familial Case.CG-EXP-161

[+] Experiment: Siggberg et al.: High-resolution SNP array analysis of patients with developmental disorder and norm...CG-EXP-175

[+] Experiment: Tyybäkinoja et al: Amplified, lost, and fused genes in 11q23-25 amplicon in acute myeloid leukemia,...CG-EXP-1

[+] Experiment: Usvasalo et al.: Prognostic classification of patients with acute lymphoblastic leukemia by using ge...CG-EXP-54

[+] Experiment: Vauhkonen et al.: Characterizing genetically stable and unstable gastric cancers by microsatellites ...CG-EXP-25

[+] Experiment: Vauhkonen et al.: DNA copy number aberrations in intestinal-type gastric cancer revealed by array-ba...CG-EXP-7

Samples (495) 1
1
10
10
102
11
11
114
12
12
13
136
14
15
15
154
155
158
16
16
161
163
17
173
174
176
18
18
18
184
19
191
2
2
20
20
21
22
23
23
24
25
25
26
26
27
27
28
28
29
3
3
30
31
32
33
34
35
36
37
38
38
39
4
4
4
40
41
42
43
44
45
46
5
5
55
57
6
6
6
6(7)
62
7
7
8
8
9
9
91
AA201
AA202
AA203
AA204
AA205
AA206
AA207
AA208
AA209
AA210
AA211
AA212
AA213
AA214
AA215
AA216
AA217
AA218
AA219
AA220
AA221
AA222
AA223
AA224
AML935
B (02B16579)
B1T
B2N
B2T
C5N
C5T
D150-R38
D152-R33
D153-R29
D154-R34
D155-R32/R493
D156-R45
D157-R44
D162-R36
D239-R491
D240
D241
D242
D245
D246
D248
D249
D250
D252
D253-R51
D254
D255-R48
D256-R49
D257-R55
D311-R63
D312-R84
D313-R40
D315-R50
D316-R37
D320-R196/R512
D321-R81
D322-R30
D7T
Dermatofibrosarcoma protuberance, case 2
Dermatofibrosarcoma protuberance, case 3
Dermatofibrosarcoma protuberance, case 6
Dermatofibrosarcoma protuberance, Case P-2.
Dermatofibrosarcoma protuberance. Case 10
Dermatofibrosarcoma protuberance. Case 7
Dermatofibrosarcoma protuberance. Case 8
Dermatofibrosarcoma protuberance. Case 9
Dermatofibrosarcoma protuberance. Case P-1
Dupuytren's Contracture Patient 1
Dupuytren's Contracture Patient 10
Dupuytren's Contracture Patient 11
Dupuytren's Contracture Patient 12
Dupuytren's Contracture Patient 13
Dupuytren's Contracture Patient 14
Dupuytren's Contracture Patient 15
Dupuytren's Contracture Patient 16
Dupuytren's Contracture Patient 17
Dupuytren's Contracture Patient 18 (Sample a)
Dupuytren's Contracture Patient 18 (Sample b)
Dupuytren's Contracture Patient 2
Dupuytren's Contracture Patient 3
Dupuytren's Contracture Patient 4
Dupuytren's Contracture Patient 5
Dupuytren's Contracture Patient 6
Dupuytren's Contracture Patient 7
Dupuytren's Contracture Patient 8
Dupuytren's Contracture Patient 9
E1N
E1T
E2T
E3T
FSbIOR-EbN1
FSbIOR-EbN11
FSbIOR-EbN12
FSbIOR-EbN13
FSbIOR-EbN16
FSbIOR-EbN18
FSbIOR-EbN2
FSbIOR-EbN3
FSbIOR-EbN4
FSbIOR-EbN5
FSbIOR-EbN6
FSbIOR-EbN7
FSbIOR-EbN8
GIST no. 10
GIST no. 12
GIST no. 2
GIST no. 20
GIST no. 24
GIST no. 31
GIST no. 38
GIST no. 39
GIST no. 41
GIST no. 43
GIST no. 44
GIST no. 46
GIST no. 48
GIST no. 5
GIST no. 50
GIST no. 52
GIST no. 56-1
GIST no. 56-B7
GIST no. 56-D6
GIST no. 6
GIST no. 67
GIST no. 68
GIST no. 69
GIST no. 70
GIST no. 71
GIST no. 73
GIST no. 74
GIST no. 75
GIST no. 8
GIST no. PR3
GIST no. PR46
Healthy sibling
High-grade soft tissue LMS 251328213884
High-grade soft tissue LMS 251328213885
LA101
LA102
LA103
LA104
LA105
LA106
LA107
LA109
LA110
LA111
LA112
LA114
LA115
LA116
LA117
LA118
LA119
LA120
LA121
Low-grade soft tissue LMS 251328213664
Low-grade soft tissue LMS 251328213799
M13T
M17T
M19T
M7N
M7T
MDS-02-359
MDS-03-1139
MDS-03-1281
MDS-03-1396
MDS-03-1532
MDS-03-1741
MDS-03-1866
MDS-03-292
MDS-03-892
MDS-03-965
MDS-04-1494
MDS-04-1757
MDS-04-1820
MDS-04-2085
MDS-04-2353
MDS-04-2603
MDS-04-76
MDS-04-917
MDS-05-1101
MDS-05-157
MDS-05-2577
MDS-05-997
MDS-06-1352
MDS-06-1488
MDS-06-2083
MDS-06-2202
MDS-06-2666
MDS-06-2929
MDS-06-2942
MDS-07-1604
MDS-07-178
MDS-07-2292
MDS-07-2449
MDS-07-474
MDS-07-748
MDS-98-1
MDS-98-394
Mes_10 (Agilent 44K)
Mes_11 (Agilent 44K)
Mes_12 (Agilent 44K)
Mes_13 (Agilent, 44K)
Mes_14 (Agilent 44K)
Mes_15 (Agilent 44K)
Mes_16 (Agilent 44K)
Mes_17 (Agilent 44K)
Mes_18 (Agilent 44K)
Mes_19 (Agilent 44K)
Mes_2 (Agilent, 44K)
Mes_20 (Agilent 44K)
Mes_21 (Agilent 44K)
Mes_22 (Agilnet 44K)
Mes_23 (Agilent 44K)
Mes_4 (Agilent 44K)
Mes_6 (Agilent 44K)
Mes_7 (Agilent 44K)
Mes_8 (Agilent 44K)
Mes_9 (Agilent 44K)
MFH 251328217324
MFH 251328217325
MFHbIOR-EbN1
MFHbIOR-EbN10
MFHbIOR-EbN11
MFHbIOR-EbN14
MFHbIOR-EbN15
MFHbIOR-EbN16
MFHbIOR-EbN17
MFHbIOR-EbN19
MFHbIOR-EbN2
MFHbIOR-EbN20
MFHbIOR-EbN21
MFHbIOR-EbN22
MFHbIOR-EbN24
MFHbIOR-EbN25
MFHbIOR-EbN26
MFHbIOR-EbN27
MFHbIOR-EbN3
MFHbIOR-EbN4
MFHbIOR-EbN5
MFHbIOR-EbN6
MFHbIOR-EbN7
MFHbIOR-EbN9
Mother
MPD-1
MPD-10
MPD-11
MPD-12
MPD-13
MPD-14
MPD-15
MPD-16
MPD-17
MPD-18
MPD-19
MPD-2
MPD-20
MPD-21
MPD-22
MPD-23
MPD-24
MPD-25
MPD-26
MPD-27
MPD-28
MPD-29
MPD-3
MPD-30
MPD-31
MPD-32
MPD-33
MPD-34
MPD-35
MPD-4
MPD-5
MPD-6
MPD-7
MPD-8
MPD-9
NA1
NA10
NA11
NA12
NA13
NA14
NA15
NA16
NA17
NA18
NA19
NA2
NA20
NA21
NA22
NA23
NA24
NA25
NA26
NA27
NA28
NA29
NA3
NA30
NA31
NA32
NA33
NA34
NA35
NA36
NA37
NA38
NA39
NA4
NA40
NA41
NA42
NA43
NA44
NA45
NA46
NA48
NA49
NA5
NA50
NA51
NA52
NA53
NA54
NA55
NA56
NA57
NA58
NA59
NA6
NA60
NA61
NA7
NA8
NA9
OS 251328213772
OS 251328213774
OS 251328213798
OS9 cell line
Paternal grandfather
Paternal grandmother
Patient 1
Patient 10
Patient 11
Patient 12
Patient 13
Patient 14
Patient 15
Patient 16
Patient 17
Patient 18
Patient 19
Patient 2
Patient 2
Patient 20
Patient 21
Patient 22
Patient 3
Patient 3
Patient 4
Patient 5
Patient 6
Patient 7
Patient 8
Patient 9
pool 1
pool 2
pool 3
pool 4
Pool 5
Pool 6
soft tissue high grade LMS with changes in 17p (pool), Appendix 3
Soft tissue high grade LMS without changes in 17p(pool), Appendix 5
soft tissue low grade LMS with changes in 17p (pool), Appendix 2
Soft tissue low grade LMS without changes in 17p(pool), Appendix 4
T (FM.50990)
U (FM.51162)
Uterine LMS sample 1.
Uterine LMS sample 10.
Uterine LMS sample 11
Uterine LMS sample 12.
Uterine LMS sample 13.
Uterine LMS sample 14.
Uterine LMS sample 15.
Uterine LMS sample 16.
Uterine LMS sample 17.
Uterine LMS sample 18.
Uterine LMS sample 2
Uterine LMS sample 3
Uterine LMS sample 4.
Uterine LMS sample 5.
Uterine LMS sample 6.
Uterine LMS Sample 7.
Uterine LMS sample 8.
Uterine LMS sample 9.
X (FM.51509)

Created

2005-08-22 12:17:04 by Ilari Scheinin

Last modified

2010-03-19 13:10:37 by Ilari Scheinin

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